STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0608600Zinc finger protein, putative. (874 aa)    
Predicted Functional Partners:
PBANKA_1407400
mRNA-decapping enzyme 2, putative.
   
 0.656
PBANKA_0515900
mRNA-decapping enzyme subunit 1, putative.
    
 0.619
PBANKA_1460000
Non-specific serine/threonine protein kinase.
    
 0.551
PBANKA_1235300
Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical], putative.
   
 0.545
PBANKA_1007800
Exosome complex component RRP4, putative.
    
 0.544
PBANKA_0617500
Exosome complex component CSL4, putative.
     
 0.536
PBANKA_0712600
14-3-3 protein; Belongs to the 14-3-3 family.
   
 0.531
PBANKA_1020500
14-3-3 protein, putative.
   
 0.531
PBANKA_1138100
14-3-3 protein, putative; Belongs to the 14-3-3 family.
   
 0.531
PBANKA_1126400
Transportin, putative.
     
 0.527
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.