STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1107100Subtilisin-like protease 1; Belongs to the peptidase S8 family. (599 aa)    
Predicted Functional Partners:
PBANKA_1139700
Protein AMR1, putative.
  
  
 0.726
PBANKA_1326400
Glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.603
PBANKA_0911700
Subtilisin-like protease 2; Belongs to the peptidase S8 family.
     
  0.539
PBANKA_1217000
Peptidase, putative.
   
 
 0.521
PBANKA_0409700
Aspartyl protease; Belongs to the peptidase A1 family.
    
 0.501
PBANKA_1326000
GTP-binding protein, putative.
   
 
 0.500
PBANKA_1352000
Elongation factor 1-gamma, putative.
   
 
 0.481
PBANKA_0412400
RING finger protein RNF1, putative.
    
 0.462
PBANKA_0512300
RING zinc finger protein, putative.
    
 0.462
PBANKA_0105800
RING zinc finger protein, putative.
    
 0.462
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.