STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1107100Subtilisin-like protease 1; Belongs to the peptidase S8 family. (599 aa)    
Predicted Functional Partners:
PBANKA_0932000
Rhoptry neck protein 4.
   
 0.664
PBANKA_0412400
RING finger protein RNF1, putative.
   
 0.635
PBANKA_0512300
RING zinc finger protein, putative.
   
 0.635
PBANKA_0105800
RING zinc finger protein, putative.
   
 0.635
PBANKA_1202600
E3 ubiquitin-protein ligase, putative.
   
 0.635
PBANKA_1205500
RING zinc finger protein, putative.
   
 0.635
PBANKA_1036500
RING zinc finger protein, putative.
   
 0.635
PBANKA_1244300
RING zinc finger protein, putative.
   
 0.635
PBANKA_0612000
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
     
 0.587
PBANKA_0405700
ATP-dependent Clp protease proteolytic subunit.
     
 0.587
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.