STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1116300Malate:quinone oxidoreductase, putative. (520 aa)    
Predicted Functional Partners:
PBANKA_1017900
Phosphoenolpyruvate carboxylase.
     
 0.963
PBANKA_0506700
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.955
PBANKA_0828100
Fumarate hydratase, putative.
     
 0.939
PBANKA_1355900
Phosphoenolpyruvate carboxykinase, putative.
     
 0.900
PBANKA_0302300
Aspartate aminotransferase.
     
 0.895
PBANKA_1014000
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.846
PBANKA_1009500
Glutamate synthase [NADH], putative.
  
 
 0.846
PBANKA_1026200
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.846
PBANKA_1228200
Glutamate dehydrogenase, putative.
    
 0.846
PBANKA_0304300
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.805
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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