STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1004100NYN domain-containing protein, putative. (743 aa)    
Predicted Functional Partners:
PBANKA_0721700
Ran-specific GTPase-activating protein 1, putative.
   
 0.995
PBANKA_0315600
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.993
PBANKA_1407500
Uncharacterized protein.
   
 0.791
PBANKA_0414600
40S ribosomal protein S15A, putative; Belongs to the universal ribosomal protein uS8 family.
   
 
 0.779
PBANKA_1439400
Histone chaperone ASF1, putative.
    
 0.771
PBANKA_1416300
40S ribosomal protein S19, putative; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.732
PBANKA_1231000
40S ribosomal protein S11, putative; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.728
PBANKA_0522800
40S ribosomal protein S19, putative.
   
 
 0.727
PBANKA_1325000
40S ribosomal protein S28e, putative.
   
   0.722
PBANKA_1234200
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.716
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.