STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1142500Signal recognition particle receptor subunit alpha, putative. (546 aa)    
Predicted Functional Partners:
PBANKA_1313800
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
 
0.998
PBANKA_1459900
Signal recognition particle receptor subunit beta, putative.
   
 0.998
PBANKA_0912200
Signal recognition particle subunit SRP72, putative.
   
 0.963
PBANKA_1120800
Signal recognition particle subunit SRP68, putative.
   
 0.953
PBANKA_1338600
60S ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.948
PBANKA_1019500
60S ribosomal protein L5, putative.
   
 
 0.939
PBANKA_0213100
Signal recognition particle subunit SRP9, putative.
   
 0.932
PBANKA_1359000
Protein transport protein SEC61 subunit alpha, putative.
   
 0.924
PBANKA_0602200
Signal recognition particle subunit SRP14, putative.
    
 0.918
PBANKA_1338300
60S ribosomal protein L6, putative.
   
 
 0.914
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.