STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0806700Uncharacterized protein. (4658 aa)    
Predicted Functional Partners:
PBANKA_1436100
Heterochromatin protein 1.
    
 0.801
PBANKA_1460000
Non-specific serine/threonine protein kinase.
    
 0.711
PBANKA_0826500
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 
 0.661
PBANKA_0416500
Copper-transporting ATPase.
   
  
 0.658
PBANKA_1315500
Sortilin.
   
 0.657
PBANKA_1304300
Zinc finger protein, putative.
   
 0.651
PBANKA_1218100
Oocyst capsule protein Cap380.
    
 0.634
PBANKA_0209800
RING-type domain-containing protein.
    
 0.595
PBANKA_0109700
SWIB/MDM2 domain-containing protein, putative.
    
 
 0.570
PBANKA_0707300
Histone acetyltransferase GCN5, putative.
     
 0.550
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.