STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1226400Cactin homolog, putative. (743 aa)    
Predicted Functional Partners:
PBANKA_1315200
Pre-mRNA-splicing factor CWF18, putative.
     
 0.779
PBANKA_1435300
Pre-mRNA-processing factor 17, putative.
   
 
 0.757
PBANKA_1452800
Pre-mRNA-splicing factor CWC22, putative.
   
 
  0.736
PBANKA_1219000
Heat shock protein 90, putative.
   
 
  0.686
PBANKA_1242500
ATP-dependent RNA helicase DDX41, putative.
     
 0.672
PBANKA_0931700
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
   
  0.666
PBANKA_1243300
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
   
  0.666
PBANKA_0409100
Pre-mRNA splicing factor, putative.
     
 0.588
PBANKA_1460200
Uncharacterized protein.
   
  0.578
PBANKA_1230500
RNA and export factor binding protein, putative.
    
 0.552
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.