STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1237400Iron-sulfur assembly protein. (172 aa)    
Predicted Functional Partners:
PBANKA_0304600
Iron-sulfur assembly protein, putative.
  
0.862
PBANKA_0821000
Chaperone, putative.
  
 
 0.790
PBANKA_1318200
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
  
 0.757
PBANKA_1438600
Vacuolar iron transporter.
   
  
 0.752
PBANKA_1237900
Mitochondrial-processing peptidase subunit alpha, putative.
   
  
 0.672
PBANKA_0822300
NifU-like scaffold protein.
  
 
 0.638
PBANKA_0831700
NifU-like protein, putative.
  
 
 0.638
PBANKA_0403100
1-cys-glutaredoxin-like protein-1, putative.
  
 0.633
PBANKA_0105500
Glutaredoxin-like protein.
  
 0.633
PBANKA_1219700
Glutaredoxin-like protein.
  
 0.633
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.