STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1351100Exoribonuclease, putative. (835 aa)    
Predicted Functional Partners:
PBANKA_0821800
U4/U6 snRNA-associated-splicing factor, putative.
    
 0.751
PBANKA_1439200
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.751
PBANKA_1137900
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.717
PBANKA_1441400
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.717
PBANKA_0405500
60S ribosomal protein L7, putative.
   
 0.634
PBANKA_1131200
60S ribosomal protein L7-2, putative.
   
 0.634
PBANKA_1313400
Exosome complex exonuclease RRP6, putative.
  
 
 0.604
PBANKA_1454600
Uncharacterized protein.
    
 
 0.602
PBANKA_0401700
CLP1 P-loop domain-containing protein, putative.
   
 
 0.593
PBANKA_0403000
60S ribosomal protein L44, putative; Belongs to the eukaryotic ribosomal protein eL42 family.
    
 0.554
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.