STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1129800Tetratricopeptide repeat protein, putative. (280 aa)    
Predicted Functional Partners:
PBANKA_0930900
Ubiquitin carboxyl-terminal hydrolase UCH54, putative.
    
 0.864
PBANKA_0938600
Casein kinase 2, alpha subunit; Belongs to the protein kinase superfamily.
   
 
 0.741
PBANKA_0902400
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.684
PBANKA_1458800
Kinesin, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.684
PBANKA_0511100
Uncharacterized protein.
   
 0.590
PBANKA_1002000
RanBD1 domain-containing protein.
   
 0.590
PBANKA_0929500
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.590
PBANKA_0516200
Phosphatidylinositol N-acetylglucosaminyltransferase subunit A, putative.
     
 0.584
PBANKA_1460000
Non-specific serine/threonine protein kinase.
  
 0.516
PBANKA_0308500
Tyrosine kinase-like protein, putative.
  
 0.508
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.