STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1134800Zinc finger protein, putative. (571 aa)    
Predicted Functional Partners:
PBANKA_1133300
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 
 0.780
PBANKA_1109000
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.501
PBANKA_1353700
Nucleolar complex protein 2, putative.
   
    0.501
PBANKA_1311800
U3 small nucleolar RNA-associated protein 12, putative.
   
    0.475
PBANKA_0512500
Nucleolar preribosomal assembly protein, putative.
   
    0.455
PBANKA_0100900
ATP-dependent RNA helicase, putative.
   
  
 0.434
PBANKA_1432500
DNA-binding chaperone, putative.
   
  
 0.428
PBANKA_1035100
rRNA 2'-O-methyltransferase fibrillarin, putative.
   
    0.414
PBANKA_0720800
RNA-binding protein NOB1, putative; Belongs to the NOB1 family.
   
    0.410
PBANKA_0512400
rRNA-processing protein EBP2, putative.
   
  
 0.410
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.