STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1329600Uncharacterized protein. (2115 aa)    
Predicted Functional Partners:
PBANKA_1206300
Zinc finger protein, putative.
   
 0.935
PBANKA_1127300
DNA methyltransferase 1-associated protein 1, putative.
   
 0.933
PBANKA_1311000
Uncharacterized protein.
   
 0.910
PBANKA_1402300
Uncharacterized protein.
   
 0.896
PBANKA_1415400
Uncharacterized protein.
    
 0.893
PBANKA_0710800
Helicase SRCAP, putative.
    
 0.848
PBANKA_0823900
DNA-directed RNA polymerase II subunit RPB3, putative.
   
 0.838
PBANKA_1403400
DNA-directed RNA polymerase II subunit RPB11, putative.
   
 0.824
PBANKA_1327400
YL1 nuclear protein, putative.
    
 0.817
PBANKA_1138200
RuvB-like helicase; Belongs to the RuvB family.
    
 0.809
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.