STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1327100EF-hand calcium-binding domain-containing protein, putative. (922 aa)    
Predicted Functional Partners:
PBANKA_1445200
WD repeat-containing protein, putative.
   
 0.581
PBANKA_0939200
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.517
PBANKA_0942700
Chromatin remodeling protein, putative.
    
 0.464
PBANKA_0606700
Cysteine repeat modular protein 3.
    
 0.462
PBANKA_0615900
Cysteine repeat modular protein 2.
    
 0.462
PBANKA_1231000
40S ribosomal protein S11, putative; Belongs to the universal ribosomal protein uS11 family.
   
  0.456
PBANKA_1036400
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.424
PBANKA_0401700
CLP1 P-loop domain-containing protein, putative.
    
  0.405
PBANKA_1129300
Ribosome biogenesis protein YTM1, putative.
   
 0.403
PBANKA_1020400
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 0.402
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.