STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1228700Nucleolar protein 10, putative. (567 aa)    
Predicted Functional Partners:
PBANKA_0206600
Asparagine and aspartate rich protein 2, putative.
   
 
 0.998
PBANKA_0504900
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.998
PBANKA_0937800
Essential nuclear protein 1, putative.
   
 
 0.998
PBANKA_1021000
Uncharacterized protein.
   
 
 0.998
PBANKA_1134400
Sas10 domain-containing protein, putative.
   
 
 0.998
PBANKA_0305300
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.997
PBANKA_1405600
U3 small nucleolar RNA-associated protein 6, putative.
   
 
 0.997
PBANKA_1227900
Periodic tryptophan protein 2, putative.
   
 
 0.997
PBANKA_0511200
U3 small nucleolar ribonucleoprotein protein MPP10, putative.
   
   0.996
PBANKA_1207000
Nucleolar protein 5, putative.
   
 
 0.996
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.