Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PBANKA_0315200 | PBANKA_0708400 | A0A509AHC8 | A0A509AHQ4 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein G. | 0.999 |
PBANKA_0315200 | PBANKA_0921500 | A0A509AHC8 | A0A509ALS1 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein F, putative. | 0.999 |
PBANKA_0315200 | PBANKA_0922800 | A0A509AHC8 | A0A509AIN0 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.999 |
PBANKA_0315200 | PBANKA_1223500 | A0A509AHC8 | A0A509AM19 | Small nuclear ribonucleoprotein Sm D2. | DNA helicase PSH3, putative. | 0.780 |
PBANKA_0315200 | PBANKA_1358300 | A0A509AHC8 | A0A509AQV3 | Small nuclear ribonucleoprotein Sm D2. | Uncharacterized protein. | 0.545 |
PBANKA_0315200 | PBANKA_1363000 | A0A509AHC8 | A0A509AR20 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
PBANKA_0406300 | PBANKA_0501300 | A0A509AFR9 | A0A509ADQ6 | DNA polymerase delta small subunit, putative. | DNA polymerase. | 0.999 |
PBANKA_0406300 | PBANKA_1358300 | A0A509AFR9 | A0A509AQV3 | DNA polymerase delta small subunit, putative. | Uncharacterized protein. | 0.652 |
PBANKA_0501300 | PBANKA_0406300 | A0A509ADQ6 | A0A509AFR9 | DNA polymerase. | DNA polymerase delta small subunit, putative. | 0.999 |
PBANKA_0501300 | PBANKA_1144700 | A0A509ADQ6 | A0A509AML8 | DNA polymerase. | DNA repair endonuclease XPF, putative. | 0.674 |
PBANKA_0501300 | PBANKA_1313100 | A0A509ADQ6 | A0A509AN57 | DNA polymerase. | Crossover junction endonuclease MUS81, putative. | 0.767 |
PBANKA_0501300 | PBANKA_1358300 | A0A509ADQ6 | A0A509AQV3 | DNA polymerase. | Uncharacterized protein. | 0.627 |
PBANKA_0708400 | PBANKA_0315200 | A0A509AHQ4 | A0A509AHC8 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
PBANKA_0708400 | PBANKA_0921500 | A0A509AHQ4 | A0A509ALS1 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein F, putative. | 0.999 |
PBANKA_0708400 | PBANKA_0922800 | A0A509AHQ4 | A0A509AIN0 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.999 |
PBANKA_0708400 | PBANKA_1223500 | A0A509AHQ4 | A0A509AM19 | Small nuclear ribonucleoprotein G. | DNA helicase PSH3, putative. | 0.778 |
PBANKA_0708400 | PBANKA_1358300 | A0A509AHQ4 | A0A509AQV3 | Small nuclear ribonucleoprotein G. | Uncharacterized protein. | 0.528 |
PBANKA_0708400 | PBANKA_1363000 | A0A509AHQ4 | A0A509AR20 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
PBANKA_0921500 | PBANKA_0315200 | A0A509ALS1 | A0A509AHC8 | Small nuclear ribonucleoprotein F, putative. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
PBANKA_0921500 | PBANKA_0708400 | A0A509ALS1 | A0A509AHQ4 | Small nuclear ribonucleoprotein F, putative. | Small nuclear ribonucleoprotein G. | 0.999 |
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