STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1242700AP complex subunit beta. (936 aa)    
Predicted Functional Partners:
PBANKA_0314000
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 0.999
PBANKA_1460500
Serine/threonine protein kinase, putative.
   
 0.999
PBANKA_1433900
AP-2 complex subunit mu, putative; Belongs to the adaptor complexes medium subunit family.
   
 0.999
PBANKA_1315500
Sortilin.
     
 0.999
PBANKA_1434700
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.976
PBANKA_0417300
AP-4 complex subunit epsilon, putative.
   
 0.958
PBANKA_1319200
AP-1 complex subunit gamma, putative.
   
 0.958
PBANKA_0930000
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.945
PBANKA_1116700
AP-2 complex subunit alpha, putative.
   
 0.919
PBANKA_1459400
Clathrin adaptor domain-containing protein, putative.
   
 0.919
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.