STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1320300Mitochondrial ribosomal protein L28, putative. (281 aa)    
Predicted Functional Partners:
PBANKA_0413300
Mitochondrial ribosomal protein L29/L47, putative.
    
 
 0.972
PBANKA_0930400
Peptidyl-tRNA hydrolase ICT1, putative.
   
   0.961
PBANKA_1438800
50S ribosomal protein L24, putative.
   
   0.961
PBANKA_0518000
Ribosomal protein L27, putative.
   
   0.959
PBANKA_0108500
Mitochondrial ribosomal protein L19, putative.
   
   0.954
PBANKA_0311100
Ribosomal protein L13, mitochondrial, putative; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.953
PBANKA_0708800
Ribosomal protein L4, mitochondrial, putative.
   
 
 0.948
A0A509AT93
Apicoplast ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 0.931
PBANKA_1102700
50S ribosomal protein L28, apicoplast, putative.
     
  0.900
PBANKA_0937000
Mitochondrial ribosomal protein L11, putative; Belongs to the universal ribosomal protein uL11 family.
   
   0.887
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.