STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1438200DNA gyrase subunit A, putative. (1169 aa)    
Predicted Functional Partners:
PBANKA_1110100
Topoisomerase I, putative.
   
 
 0.881
PBANKA_0719300
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.858
PBANKA_1105400
Small ubiquitin-related modifier, putative.
    
 0.816
PBANKA_0816100
SUMO-conjugating enzyme UBC9, putative; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.738
PBANKA_1416900
Structural maintenance of chromosomes protein.
   
 
 0.723
PBANKA_1240000
Structural maintenance of chromosomes protein 6, putative.
   
 
 0.701
PBANKA_1108700
Structural maintenance of chromosomes protein.
   
 
 0.686
PBANKA_1402500
Condensin complex subunit 2, putative.
   
 
 0.674
PBANKA_0313900
Uncharacterized protein.
    
 0.622
PBANKA_1136900
E3 SUMO-protein ligase PIAS, putative.
    
 0.622
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.