Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MED6 | PBANKA_0203300 | A0A509ASA8 | A0A509ADY5 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | DNA-directed RNA polymerase II subunit RPB9, putative. | 0.990 |
| MED6 | PBANKA_0303200 | A0A509ASA8 | A0A509AE25 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | DNA-directed RNA polymerase II 16 kDa subunit, putative. | 0.984 |
| MED6 | PBANKA_0511500 | A0A509ASA8 | A0A509AFT6 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | DNA-directed RNA polymerase II subunit RPB7, putative. | 0.986 |
| MED6 | PBANKA_0708700 | A0A509ASA8 | A0A509AHP7 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.999 |
| MED6 | PBANKA_0823900 | A0A509ASA8 | A0A509AJL6 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | DNA-directed RNA polymerase II subunit RPB3, putative. | 0.990 |
| MED6 | PBANKA_1140600 | A0A509ASA8 | A0A509AMI7 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative. | 0.986 |
| MED6 | PBANKA_1301200 | A0A509ASA8 | A0A509ARA5 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.999 |
| MED6 | PBANKA_1355800 | A0A509ASA8 | A0A509ASZ9 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | DNA-directed RNA polymerases I, II, and III subunit RPABC4, putative. | 0.980 |
| MED6 | PBANKA_1403400 | A0A509ASA8 | A0A509AR92 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | DNA-directed RNA polymerase II subunit RPB11, putative. | 0.982 |
| MED6 | PBANKA_1429500 | A0A509ASA8 | A0A509ARX3 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.985 |
| PBANKA_0203300 | MED6 | A0A509ADY5 | A0A509ASA8 | DNA-directed RNA polymerase II subunit RPB9, putative. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.990 |
| PBANKA_0203300 | PBANKA_0303200 | A0A509ADY5 | A0A509AE25 | DNA-directed RNA polymerase II subunit RPB9, putative. | DNA-directed RNA polymerase II 16 kDa subunit, putative. | 0.999 |
| PBANKA_0203300 | PBANKA_0511500 | A0A509ADY5 | A0A509AFT6 | DNA-directed RNA polymerase II subunit RPB9, putative. | DNA-directed RNA polymerase II subunit RPB7, putative. | 0.999 |
| PBANKA_0203300 | PBANKA_0708700 | A0A509ADY5 | A0A509AHP7 | DNA-directed RNA polymerase II subunit RPB9, putative. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.988 |
| PBANKA_0203300 | PBANKA_0823900 | A0A509ADY5 | A0A509AJL6 | DNA-directed RNA polymerase II subunit RPB9, putative. | DNA-directed RNA polymerase II subunit RPB3, putative. | 0.999 |
| PBANKA_0203300 | PBANKA_1140600 | A0A509ADY5 | A0A509AMI7 | DNA-directed RNA polymerase II subunit RPB9, putative. | DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative. | 0.999 |
| PBANKA_0203300 | PBANKA_1301200 | A0A509ADY5 | A0A509ARA5 | DNA-directed RNA polymerase II subunit RPB9, putative. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.990 |
| PBANKA_0203300 | PBANKA_1355800 | A0A509ADY5 | A0A509ASZ9 | DNA-directed RNA polymerase II subunit RPB9, putative. | DNA-directed RNA polymerases I, II, and III subunit RPABC4, putative. | 0.999 |
| PBANKA_0203300 | PBANKA_1403400 | A0A509ADY5 | A0A509AR92 | DNA-directed RNA polymerase II subunit RPB9, putative. | DNA-directed RNA polymerase II subunit RPB11, putative. | 0.999 |
| PBANKA_0203300 | PBANKA_1429500 | A0A509ADY5 | A0A509ARX3 | DNA-directed RNA polymerase II subunit RPB9, putative. | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.999 |
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