Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PBANKA_1322200Spindle assembly abnormal protein 4, putative. (1285 aa)    
Predicted Functional Partners:
PBANKA_0606700
Cysteine repeat modular protein 3.
    
 0.561
PBANKA_0615900
Cysteine repeat modular protein 2.
    
 0.561
PBANKA_0939200
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.514
PBANKA_1445200
WD repeat-containing protein, putative.
   
 0.505
PBANKA_1020400
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 0.442
PBANKA_1036400
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.439
PBANKA_1008100
Ribosome biogenesis GTPase A, putative.
   
  0.413
PBANKA_1243400
Nucleolar preribosomal GTPase, putative.
   
  0.413
PBANKA_0511900
60S ribosomal protein L3, putative; Belongs to the universal ribosomal protein uL3 family.
    
 0.411
PBANKA_1300500
Tubulin epsilon chain, putative; Belongs to the tubulin family.
    
 0.408
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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