STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1440200Uncharacterized protein. (291 aa)    
Predicted Functional Partners:
PBANKA_0305300
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.998
PBANKA_1227100
U3 small nucleolar RNA-associated protein 14, putative.
   
 
 0.941
PBANKA_1460800
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.930
PBANKA_1350400
Uncharacterized protein.
   
 
 0.928
PBANKA_1324900
U3 small nucleolar ribonucleoprotein protein IMP3, putative.
   
 0.846
PBANKA_0712400
rRNA-processing protein FCF1, putative.
   
 0.841
PBANKA_0620100
U3 small nucleolar RNA-associated protein 7, putative.
   
 
 0.830
PBANKA_0505700
ATP-dependent RNA helicase ROK1, putative.
   
 0.823
PBANKA_0209500
ATP-dependent RNA helicase, putative.
   
 0.823
PBANKA_0705100
Protein KRI1, putative.
   
 
 0.806
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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