Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PBANKA_1342400Ribonuclease P protein subunit RPR2, putative. (239 aa)    
Predicted Functional Partners:
PBANKA_1120500
Ribonuclease P/MRP protein subunit RPP1, putative.
   
 0.995
PBANKA_1126600
Ribonuclease P protein subunit p29, putative.
   
 0.992
PBANKA_1220100
Ribonucleases P/MRP protein subunit POP1, putative.
    
 0.991
PBANKA_0924400
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 0.903
PBANKA_1310800
40S ribosomal protein S5, putative; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.870
PBANKA_0720800
RNA-binding protein NOB1, putative; Belongs to the NOB1 family.
   
 
  0.863
PBANKA_1359200
DNA/RNA-binding protein Alba 2, putative.
   
 0.863
PBANKA_1423300
DNA/RNA-binding protein Alba 1, putative.
   
 0.863
PBANKA_0912100
Casein kinase 1, putative; Belongs to the protein kinase superfamily.
     
  0.858
PBANKA_1401300
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
     
  0.857
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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