STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1342400Ribonuclease P protein subunit RPR2, putative. (239 aa)    
Predicted Functional Partners:
PBANKA_1126600
Ribonuclease P protein subunit p29, putative.
    
 0.999
PBANKA_1120500
Ribonuclease P/MRP protein subunit RPP1, putative.
   
 0.999
PBANKA_1220100
Ribonucleases P/MRP protein subunit POP1, putative.
    
 0.999
PBANKA_0720800
RNA-binding protein NOB1, putative; Belongs to the NOB1 family.
   
 
  0.992
PBANKA_1310800
40S ribosomal protein S5, putative; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.957
PBANKA_0924400
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 0.936
PBANKA_1231000
40S ribosomal protein S11, putative; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.915
PBANKA_0405400
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.911
PBANKA_0935900
Uncharacterized protein.
     
  0.900
PBANKA_0721900
60S ribosomal protein L7ae/L30e, putative.
  
 0.885
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.