STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1446200Mitosis protein dim1, putative. (142 aa)    
Predicted Functional Partners:
PBANKA_0937400
Pre-mRNA-processing factor 6, putative.
    
 0.999
PBANKA_1003100
Pre-mRNA-processing-splicing factor 8, putative.
    
 0.998
PBANKA_1202200
U5 small nuclear ribonucleoprotein component, putative.
    
 0.998
PBANKA_1006700
U4/U6 small nuclear ribonucleoprotein PRP31, putative.
    
 0.995
PBANKA_1233300
ATP-dependent RNA helicase DDX23, putative.
    
 0.994
PBANKA_0811000
Small nuclear ribonucleoprotein Sm D3.
   
  0.992
PBANKA_0707800
U5 small nuclear ribonucleoprotein 40 kDa protein, putative.
    
 0.991
PBANKA_0921500
Small nuclear ribonucleoprotein F, putative.
   
  0.991
PBANKA_0708400
Small nuclear ribonucleoprotein G.
   
 0.990
PBANKA_1027900
Small nuclear ribonucleoprotein-associated protein B, putative.
   
 0.989
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.