STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1450100mRNA methyltransferase, putative; Belongs to the MT-A70-like family. (660 aa)    
Predicted Functional Partners:
PBANKA_0213600
mRNA (N6-adenosine)-methyltransferase, putative; Belongs to the MT-A70-like family.
  
 
0.999
PBANKA_1445500
Pre-mRNA-splicing regulator, putative.
   
  0.992
PBANKA_0520500
TFIIH basal transcription factor complex helicase XPB subunit, putative.
  
    0.787
PBANKA_1023300
Cleavage and polyadenylation specificity factor subunit 4, putative.
   
 
 0.736
PBANKA_1030800
Methyltransferase, putative.
   
  
 0.701
PBANKA_0717500
Nuclear cap-binding protein subunit 2.
   
 
 0.685
PBANKA_0823900
DNA-directed RNA polymerase II subunit RPB3, putative.
   
 
 0.677
PBANKA_0511500
DNA-directed RNA polymerase II subunit RPB7, putative.
   
 
  0.676
PBANKA_0413600
Zinc finger protein, putative.
    
 
 0.676
PBANKA_0805400
DNA-directed RNA polymerases I, II, and III subunit RPABC5, putative.
   
 
  0.675
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.