STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1433500PPPDE peptidase domain-containing protein, putative. (410 aa)    
Predicted Functional Partners:
PBANKA_1222900
26S proteasome regulatory subunit RPN10, putative.
    
   0.674
PBANKA_0502200
26S proteasome regulatory subunit p55, putative.
   
   0.652
PBANKA_0715600
26S protease regulatory subunit 6B, putative; Belongs to the AAA ATPase family.
   
   0.652
PBANKA_0917900
26S protease regulatory subunit 6A, putative; Belongs to the AAA ATPase family.
   
   0.652
PBANKA_1461800
26S protease regulatory subunit 8, putative; Belongs to the AAA ATPase family.
   
   0.649
PBANKA_0205400
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
    
   0.645
PBANKA_0107100
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
    
   0.645
PBANKA_0211500
Proteasome subunit alpha type.
    
   0.645
PBANKA_0410300
26S proteasome regulatory subunit RPN12, putative.
    
   0.645
PBANKA_1233100
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
    
   0.645
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.