STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1463200Vacuolar protein sorting-associated protein 26, putative. (297 aa)    
Predicted Functional Partners:
PBANKA_0937100
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.999
PBANKA_1035500
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.999
PBANKA_1315500
Sortilin.
    
 
 0.834
PBANKA_1336300
GTPase-activating protein, putative.
   
 
 0.800
PBANKA_0418200
Ras-related protein RAB7, putative.
   
 
 0.620
PBANKA_0904100
Ras-related protein Rab-6.
   
 
 0.549
PBANKA_0616600
ATP synthase F0 subunit a-like protein, putative.
    
 
 0.542
PBANKA_1458900
Epsin-like protein, putative.
      
 0.505
PBANKA_1460500
Serine/threonine protein kinase, putative.
   
 
 0.475
PBANKA_1456400
SNARE protein, putative.
    
 
 0.473
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.