STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1140100Nucleoporin NUP205. (1828 aa)    
Predicted Functional Partners:
PBANKA_0721700
Ran-specific GTPase-activating protein 1, putative.
   
 0.999
PBANKA_1445400
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
    
 0.887
PBANKA_1407500
Uncharacterized protein.
    
 0.781
PBANKA_0930300
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.718
PBANKA_1422400
Importin subunit beta, putative.
   
 0.704
PBANKA_1118700
Acyl-CoA synthetase, putative.
   
 0.674
PBANKA_1207600
Uncharacterized protein.
   
 0.674
PBANKA_1033400
Aldo-keto reductase, putative.
   
 0.660
PBANKA_1140500
Aldehyde reductase, putative.
   
 0.660
PBANKA_1230500
RNA and export factor binding protein, putative.
   
 0.623
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.