STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1350700Tryptophan--tRNA ligase, putative. (662 aa)    
Predicted Functional Partners:
PBANKA_1464700
Tryptophan--tRNA ligase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.951
PBANKA_1139700
Protein AMR1, putative.
  
  
 0.882
PBANKA_1143600
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 
 0.869
PBANKA_1222800
Tyrosine--tRNA ligase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.768
PBANKA_1121700
Leucine--tRNA ligase, putative.
  
 
 0.754
PBANKA_0702500
Leucine--tRNA ligase, putative.
  
 
 0.751
PBANKA_0930500
Tyrosine--tRNA ligase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.744
PBANKA_1347700
Isoleucine--tRNA ligase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.739
PBANKA_1213600
Cysteine--tRNA ligase, putative.
  
  
 0.738
PBANKA_1306200
tRNA import protein tRIP.
  
 
 0.736
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.