STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1401900LisH domain-containing protein, putative. (294 aa)    
Predicted Functional Partners:
PBANKA_1206300
Zinc finger protein, putative.
   
 0.997
PBANKA_0925300
SANT domain-containing protein.
   
 0.983
PBANKA_0826500
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.982
PBANKA_0721700
Ran-specific GTPase-activating protein 1, putative.
   
 0.976
PBANKA_1112900
CPSF_A domain-containing protein.
   
 0.804
PBANKA_1433200
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.794
PBANKA_1137100
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
   
 0.792
PBANKA_0829800
Transcription initiation factor TFIID subunit 7, putative.
    
 0.791
PBANKA_0834700
Fip1 domain-containing protein.
   
 0.778
PBANKA_1343400
Uncharacterized protein.
    
 0.772
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.