STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1205900AP2 domain transcription factor AP2-I, putative. (1398 aa)    
Predicted Functional Partners:
PBANKA_1308400
Eukaryotic translation initiation factor 2-alpha kinase 1, putative.
      
 0.680
PBANKA_0307600
Syntaxin, putative.
     
 0.562
PBANKA_0112000
Syntaxin-binding protein, putative; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.523
PBANKA_1418800
SNARE protein, putative.
   
 
 0.522
PBANKA_0105700
MYND-type zinc finger protein, putative.
   
 
 0.521
PBANKA_0829700
Guanylate kinase, putative.
   
 
 0.476
PBANKA_0821300
Uncharacterized protein.
     
 0.432
PBANKA_1116800
Uncharacterized protein.
     
 0.432
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.