STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1448500Sentrin-specific protease 1, putative. (943 aa)    
Predicted Functional Partners:
PBANKA_1105400
Small ubiquitin-related modifier, putative.
   
 0.999
PBANKA_0401700
CLP1 P-loop domain-containing protein, putative.
   
 0.961
PBANKA_1228500
Sentrin-specific protease 2, putative.
    
 0.947
PBANKA_1445200
WD repeat-containing protein, putative.
    
 0.907
PBANKA_1238800
Karyopherin beta, putative.
   
 
 0.892
PBANKA_1422400
Importin subunit beta, putative.
   
 
 0.870
PBANKA_0917400
Armadillo repeat protein PF16.
   
 
 0.848
PBANKA_1320400
Uncharacterized protein.
   
 
 0.848
PBANKA_1425100
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.848
PBANKA_1036400
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
    
 0.813
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.