STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1421300Phosphoglycolate phosphatase. (322 aa)    
Predicted Functional Partners:
PBANKA_1135400
Riboflavin kinase, putative.
  
  
 0.593
PBANKA_0710100
2-oxoglutarate dehydrogenase E1 component, putative.
      
 0.578
PBANKA_1308600
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
   
  
 0.552
PBANKA_0501700
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
      
 0.483
PBANKA_0105600
Translation initiation factor IF-2, putative.
 
    0.461
PBANKA_0929700
Haloacid dehalogenase-like hydrolase, putative.
   
  
 0.457
PBANKA_1336100
Dihydroorotase, putative.
    
   0.443
PBANKA_1454600
Uncharacterized protein.
   
  
 0.414
PBANKA_1441500
U3 small nucleolar RNA-interacting protein 2, putative.
      
 0.410
PBANKA_0511300
Mitochondrial ribosomal protein S22, putative.
      
 0.408
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.