STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1430100Geranylgeranyl transferase type-2 subunit beta, putative. (534 aa)    
Predicted Functional Partners:
PBANKA_1306400
Geranylgeranyl transferase type-2 subunit alpha, putative.
    
 0.962
PBANKA_1113500
Ras-related protein Rab-1A, putative.
    
 0.777
PBANKA_1112300
Ras-related protein Rab-1B, putative.
    
 0.777
PBANKA_0418200
Ras-related protein RAB7, putative.
    
 0.775
PBANKA_1445800
Ras-related protein Rab-2, putative.
    
 0.756
PBANKA_0934500
Protein tyrosine phosphatase.
    
 0.735
PBANKA_1354100
Ras-related protein Rab-11B, putative.
    
 0.732
PBANKA_1418900
Ras-related protein Rab-11A.
    
 0.732
PBANKA_1360900
GTPase, putative.
    
 0.705
PBANKA_0904100
Ras-related protein Rab-6.
    
 0.698
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.