STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1450600Vesicle transport v-SNARE protein VTI1, putative. (291 aa)    
Predicted Functional Partners:
PBANKA_1456400
SNARE protein, putative.
   
 0.963
PBANKA_1108600
Alpha-soluble NSF attachment protein, putative.
    
 0.961
PBANKA_1244500
SNARE protein, putative.
   
 0.924
PBANKA_1316200
Syntaxin-6, putative.
   
 0.924
PBANKA_0313100
Vacuolar protein sorting-associated protein 45, putative; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.898
PBANKA_1218400
Protein transport protein SEC22, putative; Belongs to the synaptobrevin family.
   
 
 0.898
PBANKA_0836000
Vacuolar protein sorting-associated protein 33, putative; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.897
PBANKA_1346800
Qa-SNARE protein, putative.
    
 
 0.896
PBANKA_1101800
Vacuolar protein sorting-associated protein 11, putative.
    
 
 0.892
PBANKA_1454300
Vacuolar protein sorting-associated protein 16, putative.
    
 
 0.892
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.