STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1448900DNA polymerase epsilon subunit B, putative. (623 aa)    
Predicted Functional Partners:
PBANKA_1129100
DNA polymerase epsilon catalytic subunit A, putative.
   
 0.999
PBANKA_0610200
DNA replication licensing factor MCM5, putative; Belongs to the MCM family.
   
 0.998
PBANKA_1241800
DNA replication licensing factor MCM3, putative; Belongs to the MCM family.
   
 0.997
PBANKA_1415600
DNA replication licensing factor MCM4, putative; Belongs to the MCM family.
   
 0.997
PBANKA_0207400
3'-5' exonuclease, putative.
   
 
 0.995
PBANKA_1014800
ADP-dependent DNA helicase RecQ, putative.
   
 
 0.995
PBANKA_0613200
DNA polymerase.
   
 0.994
PBANKA_1216500
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.992
PBANKA_1406600
CCAAT-binding transcription factor, putative.
     
 0.992
PBANKA_0520200
ADP/ATP transporter on adenylate translocase, putative; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.991
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.