STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_0622KEGG: pna:Pnap_2655 hypothetical protein. (194 aa)    
Predicted Functional Partners:
Hbal_0620
Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: mex:Mext_0255 prophage CP4-57 regulatory.
 
   
 0.827
Hbal_2294
KEGG: cak:Caul_1056 hypothetical protein.
  
     0.705
Hbal_0625
SMART: DEAD-like helicase; KEGG: pap:PSPA7_5332 Sea12.
  
  
 0.626
Hbal_0623
KEGG: pap:PSPA7_5334 type II restriction enzyme, methylase subunit.
  
    0.620
Hbal_0626
KEGG: pap:PSPA7_5331 putative cytoplasmic protein.
       0.588
Hbal_0624
PFAM: KilA domain protein; KEGG: gur:Gura_0556 hypothetical protein.
       0.568
Hbal_3014
Hypothetical protein; KEGG: ccv:CCV52592_1750 von Willebrand factor type A domain-containing protein.
  
     0.561
Hbal_0618
PFAM: integrase family protein; KEGG: mlo:mll6432 symbiosis island integrase; Belongs to the 'phage' integrase family.
 
  
 0.543
Hbal_0726
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: pat:Patl_0767 TonB-dependent receptor.
  
     0.537
Hbal_2997
PFAM: glycosyl transferase group 1; KEGG: cja:CJA_1366 glycosyl transferase, putative, gt4F.
  
     0.509
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.