STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_0629SMART: HTTM domain protein; KEGG: ccs:CCNA_03457 hypothetical protein. (226 aa)    
Predicted Functional Partners:
Hbal_0628
KEGG: ccs:CCNA_03458 hypothetical protein.
       0.814
Hbal_0627
Hypothetical protein.
       0.559
Hbal_0630
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ilo:IL0466 RND efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.507
Hbal_0631
PFAM: acriflavin resistance protein; KEGG: pha:PSHAb0486 AcrB/AcrD/AcrF family metabolite exporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.497
Hbal_0632
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: cvi:CV_0433 outer membrane efflux protein.
       0.497
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.