STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_0643KEGG: dac:Daci_5112 hexapaptide repeat-containing transferase. (175 aa)    
Predicted Functional Partners:
Hbal_3019
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 
 0.862
Hbal_0446
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sde:Sde_2496 glyoxylase I family protein.
 
    0.754
Hbal_0357
KEGG: cak:Caul_1350 GAF domain-containing protein.
      0.722
Hbal_0642
Hypothetical protein.
       0.547
Hbal_0641
PFAM: PhoH family protein; KEGG: cak:Caul_3741 PhoH family protein.
       0.455
Hbal_1313
KEGG: pla:Plav_1491 AMP-dependent synthetase and ligase.
  
  
 0.444
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
    0.435
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
 0.433
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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