STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_0907PFAM: histone deacetylase superfamily; KEGG: mno:Mnod_6780 histone deacetylase superfamily. (300 aa)    
Predicted Functional Partners:
Hbal_1470
Hypothetical protein; KEGG: dal:Dalk_4028 SET-related domain protein.
  
 0.841
Hbal_0040
PFAM: Silent information regulator protein Sir2; KEGG: vfm:VFMJ11_1396 NAD-dependent deacetylase.
    
 
 0.714
Hbal_3073
KEGG: cvi:CV_1085 uridine kinase; PFAM: phosphoribulokinase/uridine kinase; SMART: AAA ATPase; Belongs to the uridine kinase family.
   
 0.695
Hbal_0912
PFAM: HPP family protein; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: pla:Plav_2548 HPP family protein?.
  
  
 0.608
Hbal_1039
KEGG: ccs:CCNA_03069 hypothetical protein.
    
  0.600
Hbal_1154
Hypothetical protein.
   
 0.584
Hbal_2278
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: aeh:Mlg_0532 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
  
  
 0.574
Hbal_0518
KEGG: tmz:Tmz1t_0031 TIR protein.
    
 0.573
Hbal_0556
SMART: TIR protein; KEGG: tmz:Tmz1t_0031 TIR protein.
    
 0.573
Hbal_1016
KEGG: nwi:Nwi_2239 hypothetical protein.
    
 0.573
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.