STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_1079PFAM: methyltransferase small; Methyltransferase type 12; putative RNA methylase; KEGG: pzu:PHZ_c0780 methyltransferase. (244 aa)    
Predicted Functional Partners:
Hbal_1078
KEGG: pla:Plav_0723 hypothetical protein.
       0.812
Hbal_1080
Hypothetical protein.
       0.773
Hbal_1077
Trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase; KEGG: pla:Plav_0722 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
       0.623
Hbal_0232
KEGG: ccs:CCNA_02300 cell division protein FtsX.
  
     0.546
rsmI
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.544
Hbal_1926
PFAM: DNA polymerase III chi subunit HolC; KEGG: cak:Caul_2532 DNA polymerase III subunit chi.
  
     0.463
Hbal_3062
PFAM: protein of unknown function DUF448; KEGG: cak:Caul_0032 hypothetical protein.
  
    0.427
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.