STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_1150PFAM: DSBA oxidoreductase; KEGG: dac:Daci_5356 DsbA oxidoreductase. (203 aa)    
Predicted Functional Partners:
Hbal_1151
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_5357 short-chain dehydrogenase/reductase SDR.
 
    0.940
Hbal_0939
KEGG: pmy:Pmen_3552 glutathione S-transferase-like protein.
  
     0.625
Hbal_1592
PFAM: thioesterase superfamily protein; KEGG: pag:PLES_04701 putative thioesterase.
 
     0.583
Hbal_2996
KEGG: bra:BRADO0919 hypothetical protein.
  
     0.579
Hbal_1152
Transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; KEGG: reu:Reut_A0237 hypothetical protein.
       0.565
Hbal_1149
TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: mmw:Mmwyl1_1486 sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
       0.539
Hbal_0597
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pla:Plav_1064 antibiotic biosynthesis monooxygenase.
  
    0.434
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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