STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_1199PFAM: protein of unknown function DUF1499; KEGG: eba:ebA2569 hypothetical protein. (308 aa)    
Predicted Functional Partners:
Hbal_1198
PFAM: AMP-dependent synthetase and ligase; KEGG: cak:Caul_0495 AMP-dependent synthetase and ligase.
       0.597
Hbal_0402
Hypothetical protein; KEGG: cak:Caul_4512 TonB-dependent receptor plug.
  
     0.480
Hbal_0774
KEGG: bra:BRADO0637 hypothetical protein.
  
     0.470
Hbal_1363
PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: pzu:PHZ_c3128 NADPH:quinone reductase.
  
     0.466
Hbal_2699
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pla:Plav_1883 TonB-dependent receptor.
  
     0.459
Hbal_1145
Secreted protein-like protein; KEGG: rlt:Rleg2_1016 hypothetical protein.
  
     0.457
Hbal_1466
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: sfr:Sfri_2040 TonB-dependent receptor.
  
     0.442
Hbal_1197
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cak:Caul_1971 glycerophosphoryl diester phosphodiesterase.
       0.425
Hbal_1196
Hydrolase or acyltransferase like protein (alpha/beta hydrolase superfamily); KEGG: hypothetical protein.
       0.422
Hbal_2829
KEGG: bja:bll1370 hypothetical protein.
  
     0.420
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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