STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_1408TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (107 aa)    
Predicted Functional Partners:
Hbal_1210
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pat:Patl_4069 biopolymer transport protein ExbD/TolR.
 
 
 0.878
Hbal_1211
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: sde:Sde_0355 branched-chain amino acid aminotransferase I.
 
 
 0.869
Hbal_1208
PFAM: MotA/TolQ/ExbB proton channel; KEGG: pat:Patl_2989 MotA/TolQ/ExbB proton channel.
 
 
 0.858
Hbal_0726
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: pat:Patl_0767 TonB-dependent receptor.
 
 
 0.852
Hbal_2799
TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_01051 TonB-dependent receptor.
  
 
 0.829
Hbal_1209
PFAM: MotA/TolQ/ExbB proton channel; KEGG: spl:Spea_2650 MotA/TolQ/ExbB proton channel.
 
 
 0.792
Hbal_1207
KEGG: aha:AHA_3434 TonB system biopolymer transport component.
 
     0.761
Hbal_2533
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: sbm:Shew185_4238 biopolymer transport protein ExbD/TolR.
 
 
 0.637
Hbal_2534
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: hha:Hhal_0452 biopolymer transport protein ExbD/TolR.
 
 
 0.631
Hbal_1596
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pzu:PHZ_c2096 TonB-dependent receptor.
  
   0.613
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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