STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_1529PFAM: Citrate carrier protein; KEGG: pat:Patl_1118 citrate carrier protein. (444 aa)    
Predicted Functional Partners:
Hbal_3099
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase; PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: ccs:CCNA_03663 NADP-dependent malic enzyme.
  
  
 0.578
Hbal_1528
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_0484 TonB-dependent receptor.
       0.485
Hbal_1530
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mno:Mnod_3059 transcriptional regulator, LysR family.
     
 0.471
Hbal_2571
Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; KEGG: ret:RHE_PC00060 citrate lyase, beta subunit protein; Belongs to the HpcH/HpaI aldolase family.
 
   
 0.441
Hbal_1600
Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; KEGG: ret:RHE_PC00060 citrate lyase, beta subunit protein; Belongs to the HpcH/HpaI aldolase family.
 
   
 0.435
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.