STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_1597PFAM: regulatory protein TetR; KEGG: pzu:PHZ_c2097 transcriptional regulator, TetR family. (224 aa)    
Predicted Functional Partners:
Hbal_1598
PFAM: alpha/beta hydrolase fold; KEGG: pla:Plav_2860 alpha/beta hydrolase fold.
 
     0.703
Hbal_1599
PFAM: major facilitator superfamily MFS_1; KEGG: pla:Plav_0045 major facilitator transporter.
 
     0.659
Hbal_1596
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pzu:PHZ_c2096 TonB-dependent receptor.
  
     0.486
Hbal_1682
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: hch:HCH_05072 Na+/proline symporter.
   
 
 0.421
Hbal_2527
KEGG: pfo:Pfl01_1424 hypothetical protein.
  
     0.407
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.