STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_1770KEGG: pzu:PHZ_c2200 hypothetical protein. (153 aa)    
Predicted Functional Partners:
Hbal_1768
PFAM: conserved hypothetical protein; KEGG: pla:Plav_0522 hypothetical protein; Belongs to the UPF0262 family.
 
     0.873
Hbal_1767
PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: met:M446_2636 protein tyrosine phosphatase.
 
     0.846
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
       0.820
Hbal_0350
PFAM: 2-deoxycytidine 5-triphosphate deaminase; KEGG: ccs:CCNA_02320 deoxycytidine triphosphate deaminase.
 
     0.793
Hbal_3026
Histidine kinase; KEGG: pla:Plav_0017 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
  
     0.745
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
    0.732
hisS
KEGG: pzu:PHZ_c0332 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein.
  
     0.721
Hbal_1138
PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: ccr:CC_1451 hypothetical protein.
  
     0.719
Hbal_2210
PFAM: protein of unknown function DUF1153; KEGG: azc:AZC_1033 hypothetical protein.
  
     0.719
Hbal_0886
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pla:Plav_0305 integral membrane sensor signal transduction histidine kinase.
  
     0.685
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.