STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_2103PFAM: polysaccharide export protein; KEGG: pzu:PHZ_c2166 periplasmic protein involved in polysaccharide export. (226 aa)    
Predicted Functional Partners:
Hbal_2112
PFAM: lipopolysaccharide biosynthesis protein; KEGG: pla:Plav_1906 non-specific protein-tyrosine kinase.
 
 
 0.993
Hbal_1795
Capsular exopolysaccharide family; KEGG: noc:Noc_1497 protein-tyrosine kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
 
 0.992
Hbal_1963
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: ccr:CC_2425 HfsE.
 
  
 0.951
Hbal_2113
KEGG: cak:Caul_4817 hypothetical protein.
 
     0.756
Hbal_1969
PFAM: polysaccharide export protein; KEGG: ccs:CCNA_02514 polysaccharide secretin protein HfsD.
  
     0.739
Hbal_2645
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: csa:Csal_1711 sugar transferase.
 
  
 0.732
Hbal_2144
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: ecx:EcHS_A2184 putative polysaccharide biosynthesis protein.
 
  
 0.721
Hbal_2149
PFAM: polysaccharide biosynthesis protein; KEGG: sme:SM_b21050 putative PST type surface saccharide translocase, ExoT protein.
 
  
 0.645
Hbal_2115
PFAM: O-antigen polymerase; KEGG: rsh:Rsph17029_1208 O-antigen polymerase.
 
  
 0.573
Hbal_1968
PFAM: lipopolysaccharide biosynthesis protein; KEGG: ccr:CC_2431 hypothetical protein.
  
 
 0.557
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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