STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_2109PFAM: glycosyl transferase family 2; KEGG: rsq:Rsph17025_1960 glycosyl transferase family protein. (324 aa)    
Predicted Functional Partners:
Hbal_2117
PFAM: glycosyl transferase family 2; KEGG: mpt:Mpe_A0722 succinoglycan biosynthesis protein ExoA.
     0.886
Hbal_2115
PFAM: O-antigen polymerase; KEGG: rsh:Rsph17029_1208 O-antigen polymerase.
 
   
 0.780
Hbal_1972
PFAM: O-antigen polymerase; KEGG: cak:Caul_1595 O-antigen polymerase.
 
   
 0.705
Hbal_2906
KEGG: mrd:Mrad2831_4609 putative glucosyltransferase protein.
    
 0.576
Hbal_2142
KEGG: rsq:Rsph17025_2179 SAF domain-containing protein.
  
     0.544
Hbal_1965
PFAM: polysaccharide deacetylase; KEGG: cak:Caul_1536 polysaccharide deacetylase.
 
  
 0.542
ispDF
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).
     
 0.535
Hbal_2112
PFAM: lipopolysaccharide biosynthesis protein; KEGG: pla:Plav_1906 non-specific protein-tyrosine kinase.
 
  
 0.517
Hbal_1963
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: ccr:CC_2425 HfsE.
 
   
 0.497
Hbal_2108
TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: ccs:CCNA_01297 23S rRNA Gm2251 methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.496
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.