STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_2117PFAM: glycosyl transferase family 2; KEGG: mpt:Mpe_A0722 succinoglycan biosynthesis protein ExoA. (343 aa)    
Predicted Functional Partners:
Hbal_2906
KEGG: mrd:Mrad2831_4609 putative glucosyltransferase protein.
    
 0.913
Hbal_2109
PFAM: glycosyl transferase family 2; KEGG: rsq:Rsph17025_1960 glycosyl transferase family protein.
     0.886
Hbal_2115
PFAM: O-antigen polymerase; KEGG: rsh:Rsph17029_1208 O-antigen polymerase.
 
   
 0.710
Hbal_2112
PFAM: lipopolysaccharide biosynthesis protein; KEGG: pla:Plav_1906 non-specific protein-tyrosine kinase.
 
  
 0.592
Hbal_2114
PFAM: glycosyl transferase family 2; KEGG: atc:AGR_L_1609 glucosyltransferase protein.
 
 
   0.566
Hbal_2104
PFAM: glycosyl transferase family 2; KEGG: avi:Avi_5934 succinoglycan biosynthesis glycosyltransferase.
 
 
   0.557
ispDF
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).
     
 0.535
Hbal_1795
Capsular exopolysaccharide family; KEGG: noc:Noc_1497 protein-tyrosine kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
  
 0.531
Hbal_2148
PFAM: glycosyl transferase family 2; KEGG: dde:Dde_0844 cell wall biosynthesis glycosyltransferase-like protein.
 
 
   0.512
Hbal_2118
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rpc:RPC_4741 cobyrinic acid a,c-diamide synthase.
  
  
 0.488
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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