STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_2178PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cja:CJA_2539 exogenous ferric siderophore TonB-dependent receptor. (782 aa)    
Predicted Functional Partners:
Hbal_2180
KEGG: mms:mma_3615 ABC-type transport system, periplasmic component.
 
     0.745
Hbal_0124
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ilo:IL2154 outer membrane protein.
  
  
 0.741
Hbal_2181
KEGG: xcb:XC_1337 hypothetical protein.
 
     0.731
Hbal_2182
PFAM: PepSY-associated TM helix domain protein; KEGG: rpe:RPE_4573 PepSY-associated TM helix domain protein.
 
     0.708
Hbal_0961
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_0346 TonB-dependent receptor.
  
  
 0.630
Hbal_1172
TIGRFAM: TonB family protein; KEGG: vsa:VSAL_II0901 TonB3 protein.
 
 
 0.614
Hbal_1474
KEGG: cja:CJA_1195 hypothetical protein.
 
     0.613
Hbal_2584
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pat:Patl_2319 TonB-dependent receptor.
  
  
 0.590
Hbal_1408
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.554
Hbal_2572
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: smt:Smal_0917 TonB-dependent siderophore receptor.
  
  
0.517
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.